miRBase entry: str-mir-8399

Stem-loop str-mir-8399


Accession
MI0027180
Description
Strongyloides ratti str-mir-8399 precursor miRNA


Sequence

UUUCAGUAGGGACUUUAUUAAAacuaaaagaaaguaauuUAAUGAUGUCUUACGGAAAUA
((((.(((((.((.(((((((((((.......)))..)))))))).))))))).))))..

Structure
--    A     G  U        --   aa 
  UUUC GUAGG AC UUAUUAAA  acu  a
  |||| ||||| || ||||||||  |||  a
  AAAG CAUUC UG AGUAAUuu  uga  g
AU    G     -  U        aa   aa 


Annotation confidence Not enough data
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Genome context
Sratti_scf00001_Chr02: 1045981-1046040 [+]

Database links

Mature str-miR-8399-5p

Accession MIMAT0033492
Description Strongyloides ratti str-miR-8399-5p mature miRNA
Sequence 1 - UUUCAGUAGGGACUUUAUUAAA - 22
Evidence experimental
Illumina [1]

Mature str-miR-8399-3p

Accession MIMAT0033493
Description Strongyloides ratti str-miR-8399-3p mature miRNA
Sequence 40 - UAAUGAUGUCUUACGGAAAUA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260