miRBase entry: str-mir-8400

Stem-loop str-mir-8400


Accession
MI0027181
Description
Strongyloides ratti str-mir-8400 precursor miRNA


Sequence

UGUGGGUUAAAUCAUCUAGAUUcauagauuaacauacgaUUCUAGGUAAUUUAAGCUACAAA
(((((.((((((.(((((((.((.((........)).)).))))))).)))))).)))))..

Structure
--     G      C       U  a  gau 
  UGUGG UUAAAU AUCUAGA Uc ua   u
  ||||| |||||| ||||||| || ||    
  ACAUC AAUUUA UGGAUCU ag au   a
AA     G      A       U  c  aca 


Annotation confidence Not enough data
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Genome context
Sratti_scf00013_Chr00: 356724-356785 [+]

Database links

Mature str-miR-8400-5p

Accession MIMAT0033494
Description Strongyloides ratti str-miR-8400-5p mature miRNA
Sequence 1 - UGUGGGUUAAAUCAUCUAGAUU - 22
Evidence experimental
Illumina [1]

Mature str-miR-8400-3p

Accession MIMAT0033495
Description Strongyloides ratti str-miR-8400-3p mature miRNA
Sequence 40 - UUCUAGGUAAUUUAAGCUACAAA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260