miRBase entry: sma-mir-8435

Stem-loop sma-mir-8435


Accession
MI0027228
Description
Schistosoma mansoni sma-mir-8435 precursor miRNA


Sequence

cacuacugUAAAAUGAUUAUAGGUUAAUcuucuuuuuuuucgaaugaauugacgucaguuauuuuggaauguacaugauuucgaauggaucgauuuaGAUUUUUCACGUAAUCAUAauuauaggucgu
.....((((((.((((((((.((..(((((((..(((.((((((.....(((((((((.....)))..)))).))....)))))).)))..))...)))))..))..))))))))..)))))).....

Structure
cacua      -A        -A  UU     ---  uu   u      ugaau  -    --   u 
     cugUAA  AUGAUUAU  GG  AAUcu   uc  uuu uucgaa     ug acgu  cag u
     ||||||  ||||||||  ||  |||||   ||  ||| ||||||     || ||||  ||| a
     gauauu  UACUAAUG  CU  UUAGa   ag  agg aagcuu     ac ugua  guu u
ugcug      aA        CA  UU     uuu  cu   u      -uagu  a    ag   u 


Annotation confidence Not enough data
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Genome context
Chr_3: 3242087-3242214 [+]

Database links

Mature sma-miR-8435-5p

Accession MIMAT0033574
Description Schistosoma mansoni sma-miR-8435-5p mature miRNA
Sequence 9 - UAAAAUGAUUAUAGGUUAAU - 28
Evidence experimental
SOLiD [1]

Mature sma-miR-8435-3p

Accession MIMAT0033575
Description Schistosoma mansoni sma-miR-8435-3p mature miRNA
Sequence 98 - GAUUUUUCACGUAAUCAUA - 116
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402