miRBase entry: sma-mir-8456

Stem-loop sma-mir-8456


Accession
MI0027253
Description
Schistosoma mansoni sma-mir-8456 precursor miRNA


Sequence

auaaugcuguauagUUACUUUGUUUUAUUUUGGguuuuccagggcgaaauucauuugacuuuuauuaacguaaguuauuaacaaucauugcuuuucacuugaugugacucACUAACUAUAGGUUUAUGCAcagcuu
.....(((((.((...((((....(((...((((((...((((..((((..((..(((...(((.((((....)))).)))...))).))..)))).))))....)))))).)))....))))...)).)))))..

Structure
auaau     a  gUU    UGUU   UUU      -uuc    gc    uu  uu   cuu   u    g 
     gcugu ua   ACUU    UUA   UGGguu    cagg  gaaa  ca  uga   uua uaac u
     ||||| ||   ||||    |||   ||||||    ||||  ||||  ||  |||   ||| ||||  
     cgacA GU   UGGA    AAU   Acucag    guuc  cuuu  gu  acu   aau auug a
---uu     C  AUU    UAUC   --C      ugua    -a    uc  -u   aac   u    a 


Annotation confidence Not enough data
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Genome context
Chr_7: 6356594-6356729 [+]

Database links

Mature sma-miR-8456-5p

Accession MIMAT0033624
Description Schistosoma mansoni sma-miR-8456-5p mature miRNA
Sequence 15 - UUACUUUGUUUUAUUUUGG - 33
Evidence experimental
SOLiD [1]

Mature sma-miR-8456-3p

Accession MIMAT0033625
Description Schistosoma mansoni sma-miR-8456-3p mature miRNA
Sequence 111 - ACUAACUAUAGGUUUAUGCA - 130
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402