miRBase entry: sma-mir-8462

Stem-loop sma-mir-8462


Accession
MI0027263
Description
Schistosoma mansoni sma-mir-8462 precursor miRNA


Sequence

gauuaacucuuuugaauccauucuaaauaaucugaucaugUGAUUAAUUUGAUAAGGUAUuuuuugcauaaaauuauGAAUGAUCAAAUAAUUGGCaggggauuaugaaaaaggaugguaaaaaaggagucacaa
.....((((((((....(((((((..(((((((.....(((.(...(((((((....(((..(((.....)))..)))....)))))))...).)))..))))))).....)))))))....)))))))).....

Structure
gauua        gaau       ---aa       gauca   G UUA       AAGG   uu   g 
     acucuuuu    ccauucu     auaaucu     ugU A   AUUUGAU    UAU  uuu c
     ||||||||    |||||||     |||||||     ||| |   |||||||    |||  ||| a
     ugaggaaa    gguagga     uauuagg     aCG U   UAAACUA    Gua  aaa u
aacac        aaau       aaaag       ---gg   G UAA       GUAA   uu   a 


Annotation confidence Not enough data
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Genome context
Chr_W: 42763964-42764098 [-]

Database links

Mature sma-miR-8462-5p

Accession MIMAT0033643
Description Schistosoma mansoni sma-miR-8462-5p mature miRNA
Sequence 41 - UGAUUAAUUUGAUAAGGUAU - 60
Evidence experimental
SOLiD [1]

Mature sma-miR-8462-3p

Accession MIMAT0033644
Description Schistosoma mansoni sma-miR-8462-3p mature miRNA
Sequence 78 - GAAUGAUCAAAUAAUUGGC - 96
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402