miRBase entry: sma-mir-8466

Stem-loop sma-mir-8466


Accession
MI0027267
Description
Schistosoma mansoni sma-mir-8466 precursor miRNA


Sequence

aucgcuuaaaagggaggaauGAAUUCGCGGAAUAAAACGuauguaguaacauuaaagcucaggaucuaagggaacauaaaaaugaguacgccuacacuacCGUUUCACGCAAUAUUCCAAuaacucagcuuuuaauuaaa
.....(((((((.(((..((((((..((((((....(((...(((((.........(((((.....................)))))........))))))))))).)))...))))..))..)))..))))))).....

Structure
aucgc       -g   ga  --    -UC   -   UAAA   uau     aacauuaaa     ggaucuaag 
     uuaaaag  gag  au  GAAU   GCG GAA    ACG   guagu         gcuca         g
     |||||||  |||  ||  ||||   ||| |||    |||   |||||         |||||         g
     aauuuuc  cuc  uA  CUUA   CGC CUU    UGC   cauca         ugagu         a
aaauu       ga   aa  AC    UAA   A   ----   ---     -cauccgca     aaaaauaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Chr_W: 17491888-17492027 [+]

Database links

Mature sma-miR-8466-5p

Accession MIMAT0033651
Description Schistosoma mansoni sma-miR-8466-5p mature miRNA
Sequence 21 - GAAUUCGCGGAAUAAAACG - 39
Evidence experimental
SOLiD [1]

Mature sma-miR-8466-3p

Accession MIMAT0033652
Description Schistosoma mansoni sma-miR-8466-3p mature miRNA
Sequence 101 - CGUUUCACGCAAUAUUCCAA - 120
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402