miRBase entry: sma-mir-8482

Stem-loop sma-mir-8482


Accession
MI0027284
Description
Schistosoma mansoni sma-mir-8482 precursor miRNA


Sequence

agagugugguuugcagacaauuacuuggugAAUGGGUUAAUUAUAAUGACaauaacaauaauaugauaggUAAGAUGAGUAAUAAGGUGcuaaguauuuguauuaaguaaaucacuaaua
.....(((((((((..((((.(((((((((.....((((.((((....((..((.((......)).)).))...)))).))))....))))))))).)))).....))))))))).....

Structure
agagu         ---ag    u         AAUGG    A    AAUG  aa  a  au 
     gugguuugc     acaa uacuuggug     GUUA UUAU    AC  ua ca  a
     |||||||||     |||| |||||||||     |||| ||||    ||  || ||   
     cacuaaaug     uguu augaaucGU     UAAU AGUA    Ug  au gu  a
auaau         aauua    u         -GGAA    G    -GAA  -g  a  au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
SC_0199: 383413-383532 [-]

Database links

Mature sma-miR-8482-5p

Accession MIMAT0033685
Description Schistosoma mansoni sma-miR-8482-5p mature miRNA
Sequence 31 - AAUGGGUUAAUUAUAAUGAC - 50
Evidence experimental
SOLiD [1]

Mature sma-miR-8482-3p

Accession MIMAT0033686
Description Schistosoma mansoni sma-miR-8482-3p mature miRNA
Sequence 71 - UAAGAUGAGUAAUAAGGUG - 89
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402