Stem-loop sly-MIR164b

Accession

MI0027571

Description

Solanum lycopersicum sly-MIR164b precursor miRNA

Literature search

18 open access papers mention sly-MIR164b
(112 sentences)

Sequence

guUGGAGAAGCAGGGCACGUGCAaauucuuguauucgacaauauaugcauuacuaaugguaaugcaugaauuuugCACGUGUUCUCCUUCUCCAAC
((((((((((.(((((((((((((((((((((.....))))...((((((((((...))))))))))))).)))))))))))))).))))))))))

Structure

          C              -   uuguauucgacaauau          a 
guUGGAGAAG AGGGCACGUGCAaa uuc                augcauuacu  
|||||||||| |||||||||||||| |||                |||||||||| a
CAACCUCUUC UCUUGUGCACguuu aag                uacguaaugg  
          C              u   ----------------          u 

Annotation confidence Not enough data

Genome context

chr1: 89971259-89971354 [+]

Mature sly-miR164b-5p

• Accession: MIMAT0033975
• Description: Solanum lycopersicum sly-miR164b-5p mature miRNA
• Sequence: 3 - UGGAGAAGCAGGGCACGUGCA - 23
• Evidence: experimental ; Northern [1]

Mature sly-miR164b-3p

• Accession: MIMAT0033976
• Description: Solanum lycopersicum sly-miR164b-3p mature miRNA
• Sequence: 76 - CACGUGUUCUCCUUCUCCAAC - 96
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 24085581
   The tomato NAC transcription factor SlNAM2 is involved in flower-boundary morphogenesis
   Hendelman A, Stav R, Zemach H, Arazi T
   J Exp Bot (2013) 64:5497-5507