miRBase entry: gra-MIR8632

Stem-loop gra-MIR8632


Accession
MI0027573
Description
Gossypium raimondii gra-MIR8632 precursor miRNA


Sequence

gagguuguuuauaaaccuaauuuguuuggaguuccaacuucuaacucauuuucagccuuguuucuuucgaauauaguuguuuucuaccuaaaccacgcaagcaauugaaagaauuagguugaaaAUGAGCUAGAAGUUGGAACUCuaaaaaccaa
.(((((.......)))))......(((((((((((((((((((.((((((((((((((...(((((((((.....((.((((.......)))).))........)))))))))..)))))))))))))).)))))))))))))))))))......

Structure
gagguuguuuauaaaccuaauuug                   a              ugu         ---auaua  u    uc 
                        uuuggaguuccaacuucua cucauuuucagccu   uucuuucga        gu guuu  u
                        ||||||||||||||||||| ||||||||||||||   |||||||||        || ||||  a
                        aaauCUCAAGGUUGAAGAU GAGUAaaaguugga   aagaaaguu        ca caaa  c
------------------aaccaa                   C              -uu         aacgaacg  c    uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 49368627-49368781 [-]

Database links

Mature gra-miR8632

Accession MIMAT0033978
Description Gossypium raimondii gra-miR8632 mature miRNA
Sequence 125 - AUGAGCUAGAAGUUGGAACUC - 145
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629