miRBase entry: gra-MIR7504d

Stem-loop gra-MIR7504d


Accession
MI0027661
Description
Gossypium raimondii gra-MIR7504d precursor miRNA
Gene family
MIPF0001798; MIR7504


Sequence

caauaggagaaugacaaaucauauuuuucuuucugaucuucagcuuuuuccucuucaaaaauuuuaaauucaacaaaaauuuuaaaaaucAGGAAAAAAAAUCUGAUUUGUCAUuauucuauua
.(((((((.((((((((((((.((((((.((((((((........................(((((((............))))))))))))))).)))))).)))))))))))).))))))).

Structure
c       g            u      c        cuucagcuuuuuccucuucaaaaa       uucaa 
 aauagga aaugacaaauca auuuuu uuucugau                        uuuuaaa     c
 ||||||| |||||||||||| |||||| ||||||||                        |||||||      
 uuaucuu uUACUGUUUAGU UAAAAA AAGGAcua                        aaaauuu     a
a       a            C      A        ------------------------       uaaaa 


Annotation confidence Not enough data
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Genome context
chr8: 43497227-43497350 [+]

Database links

Mature gra-miR7504d

Accession MIMAT0034066
Description Gossypium raimondii gra-miR7504d mature miRNA
Sequence 91 - AGGAAAAAAAAUCUGAUUUGUCAU - 114
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629