miRBase entry: gra-MIR8706a

Stem-loop gra-MIR8706a


Accession
MI0027687
Description
Gossypium raimondii gra-MIR8706a precursor miRNA
Gene family
MIPF0001953; MIR8706


Sequence

auuuaaguugAGUUUUAGGAUUGAUUUGAUGAAAguaaauugcuaauauuauuagcuaauuaugaauuuuuauuaaaucaacucugaaacucgaauucaac
.......((((((((((((.((((((((((((((((.((((((((((...)))))).))))....)))))))))))))))).)))))))))))).......

Structure
auuuaag            A                ---a    -      a 
       uugAGUUUUAGG UUGAUUUGAUGAAAgu    aauu gcuaau  
       |||||||||||| ||||||||||||||||    |||| |||||| u
       agcucaaagucu aacuaaauuauuuuua    uuaa cgauua  
caacuua            c                agua    u      u 


Annotation confidence Not enough data
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Genome context
chr10: 7112929-7113029 [+]

Database links

Mature gra-miR8706a

Accession MIMAT0034092
Description Gossypium raimondii gra-miR8706a mature miRNA
Sequence 11 - AGUUUUAGGAUUGAUUUGAUGAAA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629