miRBase entry: gra-MIR8706b

Stem-loop gra-MIR8706b


Accession
MI0027688
Description
Gossypium raimondii gra-MIR8706b precursor miRNA
Gene family
MIPF0001953; MIR8706


Sequence

uuuuaauuugAGUUUUAGGAUUGAUUUGAUGAAAguuaauggcuaauauuauuagcuaauuauaaauuuucagcaaaucaacucuaaaacacgaauuaaac
.(((((((((.((((((((.((((((((.((((((((((((((((((...))))))).))))...))))))).)))))))).)))))))).))))))))).

Structure
u         A        A        A       ---    -       a 
 uuuaauuug GUUUUAGG UUGAUUUG UGAAAgu   uaau ggcuaau  
 ||||||||| |||||||| |||||||| |||||||   |||| ||||||| u
 aaauuaagc caaaaucu aacuaaac acuuuua   auua ucgauua  
c         a        c        g       aau    a       u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr9: 24856239-24856339 [+]

Database links

Mature gra-miR8706b

Accession MIMAT0034093
Description Gossypium raimondii gra-miR8706b mature miRNA
Sequence 11 - AGUUUUAGGAUUGAUUUGAUGAAA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629