miRBase entry: gra-MIR7492e

Stem-loop gra-MIR7492e


Accession
MI0027710
Description
Gossypium raimondii gra-MIR7492e precursor miRNA
Gene family
MIPF0001661; MIR7492


Sequence

ccgcuaaaggCCAUGAUCUUUAGCGGCGUUUgcguuaaaagcgucacuaaagaccaucaucuuuagcggcguuuguaguagaagcgcugcuaaaggucaugauaucuagcgacguuuguggcaaaagugccgcuaaagaccaugaucuuuagcggc
((((((((((.((((.(((((((((((((((((.....(((((((.(((.....(((.((((((((((((((((.......)))))))))))))))).))).....))).)))))))...)))))..)))))))))))).)))).)))))))))).

Structure
-          C    A            --     guuaa       a   aagac   c                gu 
 ccgcuaaagg CAUG UCUUUAGCGGCG  UUUgc     aagcguc cua     cau aucuuuagcggcguuu  a
 |||||||||| |||| ||||||||||||  |||||     ||||||| |||     ||| ||||||||||||||||  g
 ggcgauuucu guac agaaaucgccgu  aaacg     uuugcag gau     gua uggaaaucgucgcgaa  u
c          a    c            ga     --gug       c   cuaua   c                ga 


Annotation confidence Not enough data
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Genome context
chr2: 5712439-5712594 [-]

Database links

Mature gra-miR7492e

Accession MIMAT0034115
Description Gossypium raimondii gra-miR7492e mature miRNA
Sequence 11 - CCAUGAUCUUUAGCGGCGUUU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629