miRBase entry: gra-MIR8740

Stem-loop gra-MIR8740


Accession
MI0027747
Description
Gossypium raimondii gra-MIR8740 precursor miRNA


Sequence

augugacauucuaauauuguaccacaucauuucuugaaaauuuauaucauaaaaauuuauauaauuuuuaauuuuuaagUAAUGAUGUGGCACAAUAUUAaaaugucgca
.(((((((((.(((((((((.((((((((((.(((((((((........((((((((.....))))))))))))))))).)))))))))).))))))))).)))))))))

Structure
a         c         a          u         uuauauca        u 
 ugugacauu uaauauugu ccacaucauu cuugaaaau        uaaaaauu a
 ||||||||| ||||||||| |||||||||| |||||||||        |||||||| u
 acgcuguaa AUUAUAACA GGUGUAGUAA gaauuuuua        auuuuuaa a
-         a         C          U         --------        u 


Annotation confidence Not enough data
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Genome context
chr4: 15549441-15549550 [-]

Database links

Mature gra-miR8740

Accession MIMAT0034152
Description Gossypium raimondii gra-miR8740 mature miRNA
Sequence 80 - UAAUGAUGUGGCACAAUAUUA - 100
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629