miRBase entry: gra-MIR8751b

Stem-loop gra-MIR8751b


Accession
MI0027773
Description
Gossypium raimondii gra-MIR8751b precursor miRNA


Sequence

aaauggagguUGAAAUUUGUAGAGAGAUAACGCUccaagcaggauccacugucagcaagaguacuaaaagcacguccaacuggaagagcauccaacuaacauggcaccgaaaauguuucgaguugaacuugcuuucaguacucuugcugacagugcguccuacuuggaauguuaucucucuacaaauuucaaccucccacu
....((((((((((((((((((((((((((((.((((((.(((((.(((((((((((((((((((.((((((.((.(((((.(((..(((((((.......)))........))))))).))))).)).)))))).))))))))))))))))))).))))).)))))).))))))))))))))))))))))))))))....

Structure
aaau                            C      c     c                   a      c  c     g   ga    --------   ac 
    ggagguUGAAAUUUGUAGAGAGAUAACG Uccaag aggau cacugucagcaagaguacu aaagca gu caacu gaa  gcau        cca  u
    |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||| || ||||| |||  ||||        |||  a
    ccuccaacuuuaaacaucucucuauugu agguuc uccug gugacagucguucucauga uuucgu ca guuga cuu  ugua        ggu  a
ucac                            a      a     c                   c      u  a     g   --    aaagccac   ac 


Annotation confidence Not enough data
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Genome context
chr4: 33504208-33504408 [+]

Database links

Mature gra-miR8751b

Accession MIMAT0034178
Description Gossypium raimondii gra-miR8751b mature miRNA
Sequence 11 - UGAAAUUUGUAGAGAGAUAACGCU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629