miRBase entry: gra-MIR8753

Stem-loop gra-MIR8753


Accession
MI0027776
Description
Gossypium raimondii gra-MIR8753 precursor miRNA


Sequence

uuggaaaauuUGCCAAAUCAGGGAAGCGAAAgguguuugcaggcagcagaguuuugaggguaguuuucaucaucucaucacucuacucccagauuauucgcuucccuaauuuggacgauuuuacuugcguuccuu
..((((((((..((((((.(((((((((((....(((((..((.((.(((((..(((((.............)))))..))))).)))))))))..))))))))))).))))))..)))))).))..........

Structure
--------uu  -      UG      C           Aggu     ca  c  c     uu     guagu 
          gg aaaauu  CCAAAU AGGGAAGCGAA    guuug  gg ag agagu  ugagg     u
          || ||||||  |||||| |||||||||||    |||||  || || |||||  |||||     u
          uc uuuuag  gguuua ucccuucgcuu    uagac  cc uc ucuca  acucu     u
uuccuugcgu  a      ca      a           --au     --  -  a     cu     acuac 


Annotation confidence Not enough data
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Genome context
chr2: 14528924-14529058 [-]

Database links

Mature gra-miR8753

Accession MIMAT0034181
Description Gossypium raimondii gra-miR8753 mature miRNA
Sequence 11 - UGCCAAAUCAGGGAAGCGAAA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629