miRBase entry: gra-MIR8763

Stem-loop gra-MIR8763


Accession
MI0027790
Description
Gossypium raimondii gra-MIR8763 precursor miRNA


Sequence

aacucaauugUUAAUACUGUUAAAUUUGUUGGUguugcauuuucaaaaaaaaaaguccacuugguagcaaaguaacuaaaaaaauggcauugcaaugaaauugaauuugacaaaaauaauauuaauaguguuaacaguuggacc
...((((((((((((((((((((..(((((..(((..((..(((((.......((((((.(((((.((...)).))))).....))).))).........)))))..)))))..)))))..))))))))))))))))))))...

Structure
aac                    AU     GG   ug  uu     --aaaaaaa   -   ----c     a  a 
   ucaauugUUAAUACUGUUAA  UUGUU  Ugu  ca  uucaa         agu cca     uuggu gc  
   ||||||||||||||||||||  |||||  |||  ||  |||||         ||| |||     ||||| || a
   gguugacaauugugauaauu  aauaa  aca  gu  aaguu         uua ggu     aauca ug  
cca                    au     aa   --  uu     aaaguaacg   c   aaaaa     a  a 


Annotation confidence Not enough data
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Genome context
chr5: 63182467-63182610 [+]

Database links

Mature gra-miR8763

Accession MIMAT0034195
Description Gossypium raimondii gra-miR8763 mature miRNA
Sequence 11 - UUAAUACUGUUAAAUUUGUUGGU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629