miRBase entry: gra-MIR8769

Stem-loop gra-MIR8769


Accession
MI0027802
Description
Gossypium raimondii gra-MIR8769 precursor miRNA


Sequence

uggggauuugccuaaggccgcaucggaggacaacuagaaauugaaaggcccuuuuuuucauugUUGAACUUUGACCGGAUCUAGGGAuuuugaccuc
.((.((..(.((((.(((((..((((((..((((..((((..(((((...)))))))))...))))..)))))).))).)))))).)..))..))..

Structure
-u  -g  uu g    a  -   ca      ga    -ua    uu     g 
  gg  ga  u ccua gg ccg  ucggag  caac   gaaa  gaaag  
  ||  ||  | |||| || |||  ||||||  ||||   ||||  ||||| c
  cc  uu  A GGAU CU GGC  AGUUUC  GUUg   cuuu  uuuuc  
cu  ag  uu G    -  A   -C      AA    uua    --     c 


Annotation confidence Not enough data
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Genome context
chr6: 35895579-35895675 [+]

Database links

Mature gra-miR8769

Accession MIMAT0034207
Description Gossypium raimondii gra-miR8769 mature miRNA
Sequence 64 - UUGAACUUUGACCGGAUCUAGGGA - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629