miRBase entry: cfa-mir-8791a

Stem-loop cfa-mir-8791a


Accession
MI0027871
Description
Canis familiaris cfa-mir-8791a precursor miRNA
Gene family
MIPF0001882; mir-8791


Sequence

cgccgaucugcacagcucggagcucggggcggcaggagagUCCUCGGUGUCCUGUGCCCUCCCGGccuccaccugucccggggcgagcgcaggauccugggcugugucccccgcgcccugggaccccgggucugcgucgcuggga
..((.(.(.((.((((((((.(((((((((((..(((.(((((..((.((((((((((.((((((............)))))).).))))))))))).)))))...)))..).))))))))).).))))).))).)).).).)).

Structure
cg  g u u  a   -     a -         - ca   --g     UC  U         - C      ccucc 
  cc a c gc cag cucgg g cucggggcg g  gga   agUCC  GG GUCCUGUGC C UCCCGG     a
  || | | || ||| ||||| | ||||||||| |  |||   |||||  || ||||||||| | ||||||      
  gg u g ug guc gggcc c gggucccgc c  ccu   ucggg  cc uaggacgcg g ggggcc     c
-a  g c c  c   u     c a         g cc   gug     -u  -         a c      cuguc 


Annotation confidence Not enough data
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Genome context
chr30: 16018399-16018543 [-]

Database links

Mature cfa-miR-8791a

Accession MIMAT0034281
Description Canis familiaris cfa-miR-8791a mature miRNA
Sequence 41 - UCCUCGGUGUCCUGUGCCCUCCCGG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545