miRBase entry: cfa-mir-8797

Stem-loop cfa-mir-8797


Accession
MI0027877
Description
Canis familiaris cfa-mir-8797 precursor miRNA


Sequence

ggcagcggggagccugucacgagggcagacUUGCCAAGGACUGAGAGCUCGGGcucggcucaggggccccgugcucccccacaucaggacugcggccgucccagccccgggcccacgcacc
....(((.((.(((((......((((.(((..(((.((..((((((((.(((((((.......))).)))).)))).......))))..))..))).)))...))))))))))).)))...

Structure
ggca   g  a     ucacga    --a   UU   -A  GA    -------    U    -   gg 
    gcg gg gccug      gggc   gac  GCC  AG  CUGA       GAGC CGGG cuc  c
    ||| || |||||      ||||   |||  |||  ||  ||||       |||| |||| |||  u
    cgc cc cgggc      cccg   cug  cgg  uc  gacu       cucg gccc ggg  c
-cca   a  -     ------    acc   -c   cg  ag    acacccc    u    c   ga 


Annotation confidence Not enough data
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Genome context
chr36: 1546410-1546530 [+]

Database links

Mature cfa-miR-8797

Accession MIMAT0034287
Description Canis familiaris cfa-miR-8797 mature miRNA
Sequence 31 - UUGCCAAGGACUGAGAGCUCGGG - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545