miRBase entry: cfa-mir-8799a

Stem-loop cfa-mir-8799a


Accession
MI0027879
Description
Canis familiaris cfa-mir-8799a precursor miRNA
Gene family
MIPF0001881; mir-8799


Sequence

cgaggggaggccggauccugggcugugucccggcgcccagugcucccggcccugCGCUGUUGGAUUCGCGCUCCAGGCcgcgcagccgccucu
.((((((..(((((..(((((((((.((((((((((..((.(((...))).))))))))..)))).)).)).)))))))).))..)).)))).

Structure
c    -  ag  -   au     -  -  u    --      cc  u   c 
 gagg gg  gc cgg  ccugg gc ug gucc  cggcgc  ag gcu  
 |||| ||  || |||  ||||| || || ||||  ||||||  || ||| c
 cucc cc  cg gcC  GGACC CG GC UAGG  GUCGCg  uc cgg  
u    g  ga  c   --     U  C  U    UU      --  c   c 


Annotation confidence Not enough data
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Genome context
chr20: 38527785-38527877 [+]

Database links

Mature cfa-miR-8799a

Accession MIMAT0034289
Description Canis familiaris cfa-miR-8799a mature miRNA
Sequence 55 - CGCUGUUGGAUUCGCGCUCCAGGC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545