miRBase entry: cfa-mir-8821

Stem-loop cfa-mir-8821


Accession
MI0027902
Description
Canis familiaris cfa-mir-8821 precursor miRNA


Sequence

uacuuggcaaguuuggggauugauuuggacaacagUACUGUGUCCUCCUAUCCAUGGgugucugagccccauggugcaguggcauggggcagcuguugagcauguguggucccaaggcugccggacacu
...((((((.((((.((((((.((.((..(((((((....((((((.(((((((((((.((....)))))))))....))))...)))))))))))))..)).))..)))))).)))))))))).....

Structure
--uac      a    g      -g  u  ga       ACUG      --C    ----       u  c 
     uuggca guuu gggauu  au ug  caacagU    UGUCCU   CUAU    CCAUGGg gu u
     |||||| |||| ||||||  || ||  |||||||    ||||||   ||||    ||||||| ||  
     ggccgu cgga cccugg  ug ac  guugucg    acgggg   ggug    gguaccc cg g
ucaca      -    a      ug  u  ga       ----      uac    acgu       -  a 


Annotation confidence Not enough data
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Genome context
chr25: 28497353-28497481 [-]

Database links

Mature cfa-miR-8821

Accession MIMAT0034311
Description Canis familiaris cfa-miR-8821 mature miRNA
Sequence 36 - UACUGUGUCCUCCUAUCCAUGG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545