miRBase entry: cfa-mir-8835

Stem-loop cfa-mir-8835


Accession
MI0027921
Description
Canis familiaris cfa-mir-8835 precursor miRNA


Sequence

cgcgagggccagagguauuuccgguuccggugcggggacuUUCGUUCUUGGUGGUCAGUUGUUGcaguugguggguaguaacugagccaagaugcugcggaaucugcuggugaggagcuucucggcuugcguuaauauggagc
.(((.(((((((((((...(((....(((((....(((.(((((((((((((..(((((((((((.........))))))))))))))))))....))))))))))))))...))))))))).))))).)))...........

Structure
----------c   a     -      auu   gguu     gcgg   c      ----       GG           agu 
           gcg gggcc agaggu   ucc    ccggu    gga uUUCGU    UCUUGGU  UCAGUUGUUGc   u
           ||| ||||| ||||||   |||    |||||    ||| ||||||    |||||||  |||||||||||   g
           ugc uucgg ucuucg   agg    ggucg    ucu aaggcg    agaaccg  agucaaugaug   g
cgagguauaau   g     c      ---   -agu     ----   -      ucgu       --           ggu 


Annotation confidence Not enough data
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Genome context
chr12: 36887516-36887658 [-]

Database links

Mature cfa-miR-8835

Accession MIMAT0034328
Description Canis familiaris cfa-miR-8835 mature miRNA
Sequence 41 - UUCGUUCUUGGUGGUCAGUUGUUG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545