miRBase entry: cfa-mir-8842

Stem-loop cfa-mir-8842


Accession
MI0027928
Description
Canis familiaris cfa-mir-8842 precursor miRNA


Sequence

ggcgagcggcgcuucucccgUGCUGUGGCUCACGCUUUGGUACaggaggccgagacucuucuggcgacggcgaccucugcggcgacggcugaggcucucgg
..((((....(((((..(((((((((((....((((.(.((.(((((((.......))))))))).).))))....))))))).))))..))))).)))).

Structure
gg    cggc     uc    -       CUCA    U G  A       cc 
  cgag    gcuuc  ccgU GCUGUGG    CGCU U GU Caggagg  g
  ||||    |||||  |||| |||||||    |||| | || |||||||  a
  gcuc    cggag  ggca cggcguc    gcgg a cg gucuucu  g
-g    ---u     uc    g       ucca    c g  -       ca 


Annotation confidence Not enough data
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Genome context
chr17: 51412614-51412714 [-]

Database links

Mature cfa-miR-8842

Accession MIMAT0034335
Description Canis familiaris cfa-miR-8842 mature miRNA
Sequence 21 - UGCUGUGGCUCACGCUUUGGUAC - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545