miRBase entry: cfa-mir-8794-2

Stem-loop cfa-mir-8794-2


Accession
MI0027935
Description
Canis familiaris cfa-mir-8794-2 precursor miRNA
Gene family
MIPF0002070; mir-8794


Sequence

ccucuuaucccaguggagcugauguccugagcuggaaucggcaaguggccuggggacaaaauggUGCCCCAUCAUCAGCCUCCCCAGUgaagggcucucuguccucugcacgg
..........(((.(((...((.(((((..(((((....(((..((((..(((((((......)).)))))))))..)))...)))))..)))))))....))).))).....

Structure
ccucuuaucc   u   -gcu  u     ga     aauc   aa    cc     -  aa 
          cag gga    ga guccu  gcugg    ggc  gugg  ugggg ac  a
          ||| |||    || |||||  |||||    |||  ||||  ||||| ||   
          guc ccu    cu cggga  UGACC    CCG  UACU  ACCCC Ug  a
-----ggcac   u   gucu  -     ag     -CCU   AC    --     G  gu 


Annotation confidence Not enough data
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Genome context
chr16: 13901238-13901350 [+]

Database links

Mature cfa-miR-8794

Accession MIMAT0034284
Description Canis familiaris cfa-miR-8794 mature miRNA
Sequence 65 - UGCCCCAUCAUCAGCCUCCCCAGU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545