miRBase entry: cfa-mir-8852

Stem-loop cfa-mir-8852


Accession
MI0027943
Description
Canis familiaris cfa-mir-8852 precursor miRNA


Sequence

gggucuguacacacguguauguguauauguggagcaugugugcaaguguccaugucuguguaugucuaugcguguggauuUGCAUUCGUGUGGACUCUGUGCAUGccagugucuguacgugagugugugcaugugcguacaugua
.....(((((.(((((((((.....((((((.((((((((((((((.(((((((...(((((.((((((....)))))).)))))...))))))).)).)))))))..))).)).)))))).....))))))))).)))))....

Structure
ggguc     a         gugua      g  -   --       -  u       ucu     u      g 
     uguac cacguguau     uaugug ag cau  gugugca ag guccaug   gugua gucuau c
     ||||| |||||||||     |||||| || |||  ||||||| || |||||||   ||||| ||||||  
     acaug guguacgug     gugcau uc gug  cGUACGU UC CAGGUGU   UACGU uaggug g
-augu     c         uguga      g  u   ac       G  U       GCU     u      u 


Annotation confidence Not enough data
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Genome context
chr16: 1148170-1148314 [-]

Database links

Mature cfa-miR-8852

Accession MIMAT0034347
Description Canis familiaris cfa-miR-8852 mature miRNA
Sequence 81 - UGCAUUCGUGUGGACUCUGUGCAUG - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545