miRBase entry: cfa-mir-8856

Stem-loop cfa-mir-8856


Accession
MI0027947
Description
Canis familiaris cfa-mir-8856 precursor miRNA


Sequence

aacaccauguuucagcucuggaauggaagacggugUGAGUACGGAGCUGGCUAGAGUGCggagcuggcugcugggcuucuauaacgggcgccgugggcacucgggugccguuucggaauucuuucuugggaua
....(((.(.......((((((((((....(((.(((..(((((.(((.(.(((((.((..(((.....)))..)))))))...).))).)))))..))))))....)))))))))).......).)))....

Structure
aaca   u uuucagc          aaga   u   AG     A   G --C     U  gg   u 
    cca g       ucuggaaugg    cgg gUG  UACGG GCU G   UAGAG GC  agc g
    ||| |       ||||||||||    ||| |||  ||||| ||| |   ||||| ||  ||| g
    ggu c       aggcuuugcc    gcu cac  gugcc cgg c   aucuu cg  ucg c
auag   u uuucuua          gugg   -   gg     g   g aau     -  gg   u 


Annotation confidence Not enough data
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Genome context
chr16: 34814768-34814900 [+]

Database links

Mature cfa-miR-8856

Accession MIMAT0034351
Description Canis familiaris cfa-miR-8856 mature miRNA
Sequence 36 - UGAGUACGGAGCUGGCUAGAGUGC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545