miRBase entry: cfa-mir-2387

Stem-loop cfa-mir-2387


Accession
MI0027966
Description
Canis familiaris cfa-mir-2387 precursor miRNA
Gene family
MIPF0001986; mir-2387


Sequence

cggggagcacgggggcgagaggccggccaggcggagcguggagggccuggaaggccuggcuuugcagcguguucuggacUCUGCAGACCCGGCCUUGGCAAGCucuuccgcugacguccccgcggccggagccccagcgcccc
.((((.((...(((((....(((((....((((.((((.(((((((.((.((((((.((.(((((((.((.......)).))))))))).))))))..)).)))))))))))..))))....)))))...))))).)).))))

Structure
c    a  acg     gaga     gcca    -g    u       c  -g      u  c       c  gu 
 gggg gc   ggggc    ggccg    ggcg  agcg ggagggc ug  aaggcc gg uuugcag gu  u
 |||| ||   |||||    |||||    ||||  |||| ||||||| ||  |||||| || ||||||| ||  c
 cccc cg   ccccg    ccggc    cugc  ucgc cuucuCG AC  UUCCGG CC AGACGUC ca  u
-    g  --a     -agg     gccc    ag    -       A  GG      C  -       U  gg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr6: 5910293-5910435 [-]

Database links

Mature cfa-miR-2387

Accession MIMAT0034370
Description Canis familiaris cfa-miR-2387 mature miRNA
Sequence 80 - UCUGCAGACCCGGCCUUGGCAAGC - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545