miRBase entry: cfa-mir-8881

Stem-loop cfa-mir-8881


Accession
MI0027978
Description
Canis familiaris cfa-mir-8881 precursor miRNA


Sequence

auggcuuuguguuuggaccugcccuagguauuugagguaggggucugaccuguguacugcucauaacugggccugucaUUUGUUUUCUCUGGUUCUGUACCugugauugguuucaaagauagagcugguaaguuucuguuc
..((((((((.((((((((...(.(((((((..(((.((((((...(((..(((.((.(((((....)))))..)))))..))).)))))).))).))))))).)...)).)))))).))))))))...............

Structure
-------------au        g      -  ugc c       uu   g      ucu   cu   u  -u     u 
               ggcuuugu uuugga cc   c uagguau  gag uagggg   gac  gug ac  gcuca a
               |||||||| |||||| ||   | |||||||  ||| ||||||   |||  ||| ||  |||||  
               ucgagaua aaacuu gg   g guCCAUG  CUU GUCUCU   UUG  Uac ug  cgggu a
cuugucuuugaaugg        g      u  uua u       -U   G      --U   UU   -  uc     c 


Annotation confidence Not enough data
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Genome context
chr7: 37488050-37488190 [+]

Database links

Mature cfa-miR-8881

Accession MIMAT0034381
Description Canis familiaris cfa-miR-8881 mature miRNA
Sequence 79 - UUUGUUUUCUCUGGUUCUGUACC - 101
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545