miRBase entry: cfa-mir-8882

Stem-loop cfa-mir-8882


Accession
MI0027981
Description
Canis familiaris cfa-mir-8882 precursor miRNA


Sequence

cugucgcucuguuuucugggcgcuuguacccuacggccucUCCGAGCUCUGACUCCCUUCCCUGGgaaagagcaccaggaacaggguagcagguuugagguacccgggcuggacucguggaggugcucagcaaacugaggaaggg
((.((.(((.((((.((((((((((.(((....((((((((.(((((.(((.((((((..(((((.........)))))...)))).)))))))))).)).....)))))).....))).)))))))))).)))).))))).)).

Structure
-  g  g   u    u          g   -ccua      -----  C     U   A  -    -UC     gaa 
 cu uc cuc guuu cugggcgcuu uac     cggccu     cU CGAGC CUG CU CCCU   CCUGG   a
 || || ||| |||| |||||||||| |||     ||||||     || ||||| ||| || ||||   |||||   g
 gg ag gag caaa gacucgugga gug     gucggg     gg guuug gac ga ggga   ggacc   a
g  a  -   u    c          g   cucag      cccau  a     -   -  u    caa     acg 


Annotation confidence Not enough data
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Genome context
chr8: 70657032-70657176 [-]

Database links

Mature cfa-miR-8882

Accession MIMAT0034384
Description Canis familiaris cfa-miR-8882 mature miRNA
Sequence 41 - UCCGAGCUCUGACUCCCUUCCCUGG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545