miRBase entry: cfa-mir-8884

Stem-loop cfa-mir-8884


Accession
MI0027983
Description
Canis familiaris cfa-mir-8884 precursor miRNA


Sequence

ugaacugauggacacaccuggggucaucccugagcggagccagguccaucaaaaccaggauguugacaguggUUUGAUGGAUUUGCUUAGCACCcgagguggccccuugccucuuuguuuaaaaaaaug
(((((....(((..((...((((((((((....((.((((.((((((((((((.(((............))))))))))))))))))).))....).))))))))).))..)))..)))))........

Structure
--------     ugau   ca  ccu         - cuga  g    c            a   ggaug 
        ugaac    gga  ca   ggggucauc c    gc gagc agguccaucaaa cca     u
        |||||    |||  ||   ||||||||| |    || |||| |||||||||||| |||      
        auuug    ucu  gu   ccccggugg g    CG UUCG UUUAGGUAGUUU ggu     u
guaaaaaa     --uu   cc  --u         a cCCA  A    -            -   gacag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 53823682-53823810 [-]

Database links

Mature cfa-miR-8884

Accession MIMAT0034386
Description Canis familiaris cfa-miR-8884 mature miRNA
Sequence 73 - UUUGAUGGAUUUGCUUAGCACC - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545