miRBase entry: cfa-mir-8885

Stem-loop cfa-mir-8885


Accession
MI0027987
Description
Canis familiaris cfa-mir-8885 precursor miRNA


Sequence

cuuuuagucuguucucuggggaggcgguaaggggccguggagcuggccucggcaccgggagaggcuggacuuccugucucUCUGUGCUGAAUGGCUGCGAUGGCGcccgcucucacugacgcagcagcugaagcacaccauaucc
.((((((.(((((...(.(((((((((....(.(((((.((((((...(((((((..((((((((.((....)).))))))))))))))).))))).).))))).))))).))).)).)...)))))))))))............

Structure
-----------c      u     cuc g  -   -    uaag g     g -     gcc       cg        u  a 
            uuuuag cuguu   u gg gag gcgg    g gccgu g agcug   ucggcac  ggagaggc gg c
            |||||| |||||   | || ||| ||||    | ||||| | |||||   |||||||  |||||||| ||  
            gaaguc gacga   a uc cuc cgcc    c CGGUA C UCGGU   AGUCGUG  UCUcucug cc u
ccuauaccacac      -     cgc g  a   u    ---- G     G G     --A       --        u  u 


Annotation confidence Not enough data
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Genome context
chr9: 9429575-9429719 [+]

Database links

Mature cfa-miR-8885

Accession MIMAT0034389
Description Canis familiaris cfa-miR-8885 mature miRNA
Sequence 81 - UCUGUGCUGAAUGGCUGCGAUGGCG - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545