miRBase entry: cfa-mir-8864-3

Stem-loop cfa-mir-8864-3


Accession
MI0028002
Description
Canis familiaris cfa-mir-8864-3 precursor miRNA
Gene family
MIPF0001919; mir-8864


Sequence

ggaaugagauaggggccccuggaugGCUGAGUCAGUUGGCCUCUUCUGAccuccuuucagggucaugaucucuggguccuggagcuuagcccuuggugaggcucccugcucag
....((((.(((((((((.(.((.(((((((((((..(((((..((((((((.......)))))).)).....))))))))..)))))))).)).).).))).))))))))).

Structure
ggaa    a     -   - c g  u        --   UU     ---CU  -      cc 
    ugag uaggg gcc c u ga gGCUGAGU  CAG  GGCCU     UC UGAccu  u
    |||| ||||| ||| | | || ||||||||  |||  |||||     || ||||||  u
    acuc guccc cgg g g uu ccgauucg  guc  cuggg     ag acuggg  u
---g    -     u   a u g  c        ag   --     ucucu  u      ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 5658031-5658143 [-]

Database links

Mature cfa-miR-8864

Accession MIMAT0034361
Description Canis familiaris cfa-miR-8864 mature miRNA
Sequence 26 - GCUGAGUCAGUUGGCCUCUUCUGA - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545