miRBase entry: cfa-mir-8898

Stem-loop cfa-mir-8898


Accession
MI0028009
Description
Canis familiaris cfa-mir-8898 precursor miRNA


Sequence

guggagagcauggucaccucucggugacuugagauagggugcugcuggccugccuuuuccccagagcuccagaugggccUCAGGACAGUUGGUAGCAGCUCCCuacugguccagagagccaggcuggccgugguccggccccg
((.(.((.((((((((((((((.(.((((..((.(((((.(((((((.(((((((....((((..........))))....))).)))..).))))))).)))))))))))).))))....)).)))))))).))).))....

Structure
----  g a  g        -  ----    g u    ug  a     u       g --   -   uuuc    gagc 
    gu g ga caugguca cc    ucuc g gacu  ag uaggg gcugcug c  cug ccu    ccca    u
    || | || |||||||| ||    |||| | ||||  || ||||| ||||||| |  ||| |||    ||||     
    cg c cu gugccggu gg    agag c cugg  uc auCCC CGACGAU G  GAC GGA    gggu    c
gccc  g -  g        c  accg    a -    --  -     U       G UU   A   CUcc    agac 


Annotation confidence Not enough data
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Genome context
chr3: 54657737-54657879 [-]

Database links

Mature cfa-miR-8898

Accession MIMAT0034408
Description Canis familiaris cfa-miR-8898 mature miRNA
Sequence 80 - UCAGGACAGUUGGUAGCAGCUCCC - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545