miRBase entry: cfa-mir-8908d-3

Stem-loop cfa-mir-8908d-3


Accession
MI0028022
Description
Canis familiaris cfa-mir-8908d-3 precursor miRNA
Gene family
MIPF0001890; mir-8908


Sequence

ccuccucugcaggccacgcugaguuuggggcccuacccagaaaggugcugauaaggcaggauacagauuAUUAGCGCCUGACUGAGUGGGGUCccgaucaguaauauaacuaccuguggcgac
............((((((((((..((((((((((((.(((..((((((((((((....(....)...))))))))))))..))).))))))))))))))))).............)))))...

Structure
ccuccucugcag     -------------     gu            c   aa            ggca g 
            gccac             gcuga  uuggggcccuac cag  aggugcugauaa    g a
            |||||             |||||  |||||||||||| |||  ||||||||||||    |  
            cggug             ugacu  agccCUGGGGUG GUC  UCCGCGAUUAuu    c u
---------cag     uccaucaauauaa     --            A   AG            -aga a 


Annotation confidence Not enough data
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Genome context
chrX: 114686137-114686259 [-]
Clustered miRNAs
8 other miRNAs are < 10 kb from cfa-mir-8908d-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-8908d

Accession MIMAT0034420
Description Canis familiaris cfa-miR-8908d mature miRNA
Sequence 70 - AUUAGCGCCUGACUGAGUGGGGUC - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545