miRBase entry: cfa-mir-2114

Stem-loop cfa-mir-2114


Accession
MI0028029
Description
Canis familiaris cfa-mir-2114 precursor miRNA
Gene family
MIPF0001464; mir-2114


Sequence

aacccucgggccaaaggacaugccacggccuccaggcuucUAGUCCCUUCCUUGAAGGAUCGGCaagucacacgcagagccucaagcaagggacuuccagcugguggcuuccagcagcuuccugcuccugaaccaccaucguc
.....(((((....((((..(((...((((.((((.((...((((((((.(((((.((.((.((.........)).)).))))))).))))))))...)))))).))))....)))...))))...)))))............

Structure
-------aaccc     ccaa    -ca   -cac    u    g  ucU        C     A  A  G  aag 
            ucggg    agga   ugc    ggcc ccag cu   AGUCCCUU CUUGA GG UC GC   u
            |||||    ||||   |||    |||| |||| ||   |||||||| ||||| || || ||   c
            agucc    uccu   acg    ucgg gguc ga   ucagggaa gaacu cc ag cg   a
cugcuaccacca     -ucg    ucg   accu    u    -  ccu        c     -  g  a  cac 


Annotation confidence Not enough data
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Genome context
chrX: 118541319-118541461 [+]

Database links

Mature cfa-miR-2114

Accession MIMAT0034427
Description Canis familiaris cfa-miR-2114 mature miRNA
Sequence 41 - UAGUCCCUUCCUUGAAGGAUCGGC - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545