miRBase entry: eca-mir-8916

Stem-loop eca-mir-8916


Accession
MI0028051
Description
Equus caballus eca-mir-8916 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
gaggagacgaggaugcaggcaggaccguucugguccuuucUGUGCGCUCCCGCAGUCUUGGGCggcguucugaaacgacccgccuuuugagaaaggaggcagcgggccagagagaaccgagcccggccggggcgucgggcc
.....(((.((((((..(......))))))).)))((((((((.((((((..(..((((((((((((((....))))..))))))...))))..)..)).)))).).)))))))..((((((((.....)))).))))...

Structure
gaggagacgaggaugcaggcaggaccguucugguc       - G    -  CG AG    ---      --    c 
                                   cuuucUG U CGCU CC  C  UCUU   GGGCgg  cguu u
                                   ||||||| | |||| ||  |  ||||   ||||||  ||||  
                                   gagagac g gcga gg  g  agag   uccgcc  gcaa g
--------ccgggcugcggggccggcccgagccaa       c g    c  ag aa    uuu      ca    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr20: 7292888-7293028 [+]

Database links

Mature eca-miR-8916

Accession MIMAT0034444
Description Equus caballus eca-miR-8916 mature miRNA
Sequence 41 - UGUGCGCUCCCGCAGUCUUGGGC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545