miRBase entry: eca-mir-8917

Stem-loop eca-mir-8917


Accession
MI0028052
Description
Equus caballus eca-mir-8917 precursor miRNA


Sequence

8 reads, 1 reads per million, 1 experiments
ccaaugcuggucgucucacaguggacagagugagagagucagcgguuggggggcaagucuccaagagaCUUGCCCUUCUUCCUCUGACCUUcccaaucuccugccacuccaggguucuggg
(((((.((((.........(((((.(((((((.(((.(((((.((..((((((((((((((...))))))))))))))..)).))))).))).))..)).)))))))))))).))..))).

Structure
-   --  g    ucgucucac     a   -  --  a   a     c  uu              c 
 cca  au cugg         agugg cag ag  ug gag gucag gg  ggggggcaagucuc  
 |||  || ||||         ||||| ||| ||  || ||| ||||| ||  |||||||||||||| a
 ggu  ug gacc         ucacc guc uc  ac cUU CAGUC CC  CUUCCCGUUCagag  
g   cu  g    ---------     -   c  ua  c   C     U  UU              a 


Annotation confidence Not enough data
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Genome context
chr20: 33720962-33721082 [-]

Database links

Mature eca-miR-8917

Accession MIMAT0034445
Description Equus caballus eca-miR-8917 mature miRNA
Sequence 69 - CUUGCCCUUCUUCCUCUGACCUU - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545