miRBase entry: eca-mir-8923-2

Stem-loop eca-mir-8923-2


Accession
MI0028079
Description
Equus caballus eca-mir-8923-2 precursor miRNA
Gene family
MIPF0001896; mir-8923


Sequence

52 reads, 5 reads per million, 1 experiments
aggaccuggcacuugggcuggggcugcugaUGGCACUCGCUCGGGGUCUGGAGCAgcugagggcgcugcugccgguuccagcgcuagaagugauggcagaaauagaacuggaguuccguccagcu
....((((((......))))))((((..(((((.(((((((.((((.((((((((((.......)))))).)))))))))))((((.......)))).............)))).))))))))).

Structure
aggaccuggcacuugggcuggg    cu     C    ----------------------------   C    U    -      ug 
                      gcug  gaUGG ACUC                            GCU GGGG CUGG AGCAgc  a
                      ||||  ||||| ||||                            ||| |||| |||| ||||||  g
                      cgac  cugcc ugag                            cga ccuu ggcc ucgucg  g
---------------------u    --     u    gucaagauaaagacgguagugaagaucg   -    -    g      cg 


Annotation confidence Not enough data
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Genome context
chr19: 2469417-2469541 [+]

Database links

Mature eca-miR-8923

Accession MIMAT0034451
Description Equus caballus eca-miR-8923 mature miRNA
Sequence 31 - UGGCACUCGCUCGGGGUCUGGAGCA - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545