miRBase entry: eca-mir-8972

Stem-loop eca-mir-8972


Accession
MI0028128
Description
Equus caballus eca-mir-8972 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
gggcgggugucuagagccgagucaggaccuuguccuuuguuguuuccaagaguguggaggaaguaggcucugcccccuccUGCCCUUGGAUACAGUCGGAGACAAagggaggcagagacauaucuacgagggcugccccacacca
((((((.(.((((((.....(((....((((..((((((((((.((((((.(((.(((((..((((...))))..)))))))).)))))).))).......)))))))))))....)))...)))).)).).)))))).......

Structure
-------      g g  -    gccga   agga    gu       -------   u      a   u     aa    g 
       gggcgg u uc uaga     guc    ccuu  ccuuugu       ugu uccaag gug ggagg  guag  
       |||||| | || ||||     |||    ||||  |||||||       ||| |||||| ||| |||||  |||| c
       cccguc g ag aucu     cag    ggag  ggaAACA       ACA AGGUUC CGU ccucc  cguc  
accacac      g g  c    --aua   agac    --       GAGGCUG   U      C   -     cc    u 


Annotation confidence Not enough data
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Genome context
chr5: 26903344-26903488 [-]

Database links

Mature eca-miR-8972

Accession MIMAT0034509
Description Equus caballus eca-miR-8972 mature miRNA
Sequence 81 - UGCCCUUGGAUACAGUCGGAGACAA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545