miRBase entry: eca-mir-8977

Stem-loop eca-mir-8977


Accession
MI0028133
Description
Equus caballus eca-mir-8977 precursor miRNA


Sequence

7 reads, 1 reads per million, 1 experiments
auuggaacacuuggagagcuuguuaaaacaguaugcaacuugagccauacuccagucuuacugauuuacagaguauagcAGUGAGGCGAGGGUAUGACUCUACaguuguacacuaaaaauacgccagguaucagguuuacaaa
.(((....((((((...(((((.......(((.(((((((.(((.(((((((..(((((((((...(((...)))...)))))))))..))))))).)))...))))))).)))..........))))).))))))...))).

Structure
a   gaac      aga     ---uuaaaac   a       --u   c       ca         auu   a 
 uug    acuugg   gcuug          agu ugcaacu   gag cauacuc  gucuuacug   uac  
 |||    ||||||   |||||          ||| |||||||   ||| |||||||  |||||||||   ||| g
 aac    uggacu   uggac          uca auguuga   CUC GUAUGGG  CGGAGUGAc   aug  
a   -auu      --a     cgcauaaaaa   c       CAU   A       AG         gau   a 


Annotation confidence Not enough data
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Genome context
chr6: 39985010-39985152 [-]

Database links

Mature eca-miR-8977

Accession MIMAT0034514
Description Equus caballus eca-miR-8977 mature miRNA
Sequence 80 - AGUGAGGCGAGGGUAUGACUCUAC - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545