miRBase entry: eca-mir-8982

Stem-loop eca-mir-8982


Accession
MI0028138
Description
Equus caballus eca-mir-8982 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
acuggcacugacucugcuuccaaacgaggccgcucuguguCACCCGGGGUAGGACUUCAGCAcaggaggucgaggggcugcgguccagcccugaguggagcaggccggcugcagucgagaggggaugcagcacccaggc
.((((..(((..(((.(((....((..(((((.(((((.((((.((((((.(((((.((((.(..(....)..)..)))).))))).)))))).)))).))))).)))))...))...))).)))..)))...))))..

Structure
-a    -ca   ac   g   ccaa  -ga     c     g    C      A     U    -A ag a 
  cugg   cug  ucu cuu    ac   ggccg ucugu uCAC CGGGGU GGACU CAGC  c  g g
  ||||   |||  ||| |||    ||   ||||| ||||| |||| |||||| ||||| ||||  |  |  
  gacc   gac  agg gag    ug   ucggc ggacg ggug gucccg ccugg gucg  g  c g
cg    cac   gu   g   -agc  acg     c     a    a      a     c    gg ag u 


Annotation confidence Not enough data
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Genome context
chr7: 3149012-3149150 [+]

Database links

Mature eca-miR-8982

Accession MIMAT0034519
Description Equus caballus eca-miR-8982 mature miRNA
Sequence 41 - CACCCGGGGUAGGACUUCAGCA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545