miRBase entry: eca-mir-8983

Stem-loop eca-mir-8983


Accession
MI0028139
Description
Equus caballus eca-mir-8983 precursor miRNA


Sequence

5 reads, 1 reads per million, 1 experiments
ggaggagaaguugaggcagguggucaagcaaguccugaagUGCGAUGUGACUCAGAGCCAGCCGCugggcgcugucccccugccccuggcugacugccugcugagcacgcugugccuggaugccgccugcccugaccucccugcc
(.(((.((.((((.((((((((((.......((((....(((((.((((.(((((((.((((.((((((.((.........)).)))))).).))).)).))))))))).)))))..)))))))))))))).)))).))))).).

Structure
- g   a  a    a          caagcaa    ugaa     A    A     -  C   - C      c  ugu 
 g agg ga guug ggcagguggu       gucc    gUGCG UGUG CUCAG AG CAG C GCuggg gc   c
 | ||| || |||| ||||||||||       ||||    ||||| |||| ||||| || ||| | |||||| ||   c
 c ucc cu cagu ccguccgccg       uagg    cgugu gcac gaguc uc guc g cggucc cg   c
c g   -  c    c          -------    --uc     c    -     g  c   a u      c  ucc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr7: 22665788-22665932 [+]

Database links

Mature eca-miR-8983

Accession MIMAT0034520
Description Equus caballus eca-miR-8983 mature miRNA
Sequence 41 - UGCGAUGUGACUCAGAGCCAGCCGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545