miRBase entry: eca-mir-8990

Stem-loop eca-mir-8990


Accession
MI0028146
Description
Equus caballus eca-mir-8990 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
gugagccggguggcugggccaaggggcugggugcugggagugugcuuucugacuggguggcacguggccuggggcuguggUGUUGACUUUGGGAGGGCCCCGGAAaccgucguccagggugcagauaagccuuggugcgcaggcg
(((.(((((((..(((.(((...((((..(((.(((((.....(((((((.(..((..(((((.(((((...)))))..)))))..)).).))))))))))))..)))...))))..))).)))....))).)))).))).....

Structure
-----   a    -   --gg   g   aag    -ug   -g     agugu       g cu  gu     -g     u 
     gug gccg ggu    cug gcc   gggc   ggu  cuggg     gcuuucu a  gg  ggcac  uggcc  
     ||| |||| |||    ||| |||   ||||   |||  |||||     ||||||| |  ||  |||||  ||||| g
     cgc uggu ccg    gac ugg   ccug   cca  GGCCC     CGGGAGG U  UC  UUGUg  gucgg  
gcgga   g    u   aaua   g   -ga    cug   AA     -----       G -U  AG     gu     g 


Annotation confidence Not enough data
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Genome context
chr7: 98037125-98037269 [-]

Database links

Mature eca-miR-8990

Accession MIMAT0034527
Description Equus caballus eca-miR-8990 mature miRNA
Sequence 81 - UGUUGACUUUGGGAGGGCCCCGGAA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545