miRBase entry: eca-mir-8993-2

Stem-loop eca-mir-8993-2


Accession
MI0028160
Description
Equus caballus eca-mir-8993-2 precursor miRNA
Gene family
MIPF0002018; mir-8993


Sequence

670 reads, 101 reads per million, 1 experiments
gggucucccacaaagaggucgcuucCUGCAGGGUCAAGGACAAGGUCAGGgaggccaugcucccuuccacaugugucccaggcccuugaucuuggacccuggacaucuggugugu
(((...)))(((.(((.(((........(((((((.(((((((((((.((((.((.(((..........))))).)))).)).))))).)))).)))))))))).)))..)))..

Structure
gggucuccc   -a   g   gcuucCUG       A    -     -  A    g  c   cucc 
         aca  aga guc        CAGGGUC AGGA CAAGG UC GGga gc aug    c
         |||  ||| |||        ||||||| |||| ||||| || |||| || |||     
         ugu  ucu cag        gucccag uucu guucc gg cccu ug uac    u
-------ug   gg   a   --------       g    a     c  a    g  -   accu 


Annotation confidence Not enough data
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Genome context
chr7: 52508673-52508787 [-]

Database links

Mature eca-miR-8993

Accession MIMAT0034531
Description Equus caballus eca-miR-8993 mature miRNA
Sequence 26 - CUGCAGGGUCAAGGACAAGGUCAGG - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545