miRBase entry: eca-mir-9025

Stem-loop eca-mir-9025


Accession
MI0028189
Description
Equus caballus eca-mir-9025 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
caguauggcuagaugcaccauagugguaagagcccuccccUGGCUUGGUAGGAGCAGUACUGGGAucagcugcugaugucugcugugugacuguugggcuuuggaguguuugacacgggggaggugucugccaucuuugauguuc
..((((......))))..((.(((((((.((..(((((((((((..((((((.(((((((((....))).))))).).))))))..))...((((((((........)))))))))))))))))..))))))).)).))......

Structure
caguauggcuagaugcac  u  -     a  gc         ---------------------------  UU      A -     -   G 
                  ca ag uggua ga  ccuccccUG                           GC  GGUAGG G CAGUA CUG G
                  || || ||||| ||  |||||||||                           ||  |||||| | ||||| |||  
                  gu uc accgu cu  ggagggggc                           ug  ucgucu u gucgu gac A
------------cuugua  u  u     -  gu         acaguuugugagguuucggguugucag  ug      g a     c   u 


Annotation confidence Not enough data
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Genome context
chr26: 39986726-39986870 [+]

Database links

Mature eca-miR-9025

Accession MIMAT0034567
Description Equus caballus eca-miR-9025 mature miRNA
Sequence 41 - UGGCUUGGUAGGAGCAGUACUGGGA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545