miRBase entry: eca-mir-9027

Stem-loop eca-mir-9027


Accession
MI0028191
Description
Equus caballus eca-mir-9027 precursor miRNA


Sequence

6 reads, 1 reads per million, 1 experiments
uuccuuaagcacguuacgcggccucggcccgguaccgcguucucauuggcuuccuguccugucaguuccagGAGCUGGCCAAUGAGUUGUCGgugcuggcgcccuucucgacgccguggacgccgcg
........((.((((.((((((.((((((((((((((((..((((((((((.....(((((.......)))))...)))))))))).)).))))))))).)))......)).))))))))))..)).

Structure
uuccuuaa  -a    a      c  ------   -         -  uu          uccug     uc 
        gc  cguu cgcggc uc      ggc ccgguaccg cg  cucauuggcu     uccug  a
        ||  |||| |||||| ||      ||| ||||||||| ||  ||||||||||     |||||  g
        cg  gcag gugccg ag      ccg ggucgugGC GU  GAGUAACCGG     AGgac  u
-------g  cc    -      c  cucuuc   c         U  -U          --UCG     cu 


Annotation confidence Not enough data
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Genome context
chr26: 26164919-26165045 [+]

Database links

Mature eca-miR-9027

Accession MIMAT0034569
Description Equus caballus eca-miR-9027 mature miRNA
Sequence 72 - GAGCUGGCCAAUGAGUUGUCG - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545