miRBase entry: eca-mir-9036

Stem-loop eca-mir-9036


Accession
MI0028200
Description
Equus caballus eca-mir-9036 precursor miRNA


Sequence

gaggcccgggaagcuggccggcucuccuccucaccugagagcggugccuacguggucacccccuuccACUGCACUGACCUGGGGUGAGUaggcgugcaggggcugacuggacugccagg
..(((((((..((((..((.((.(.(((.(((((((.((..((((((....((((..........)))).))))))..)).))))))).))).).)).))))))..))))...)))...

Structure
-ga   ---    ga    gg  g  u u   c       g  ag      cuac    ucac 
   ggc   ccgg  agcu  cc gc c ccu cucaccu ag  cggugc    gugg    c
   |||   ||||  ||||  || || | ||| ||||||| ||  ||||||    ||||     
   ccg   gguc  ucgg  gg cg g gga GAGUGGG UC  GUCACG    CAcc    c
gga   uca    ag    --  a  u c   U       G  CA      ---U    uucc 


Annotation confidence Not enough data
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Genome context
chr25: 35569914-35570032 [-]

Database links

Mature eca-miR-9036

Accession MIMAT0034578
Description Equus caballus eca-miR-9036 mature miRNA
Sequence 68 - ACUGCACUGACCUGGGGUGAGU - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545