miRBase entry: eca-mir-9039

Stem-loop eca-mir-9039


Accession
MI0028203
Description
Equus caballus eca-mir-9039 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
augcaccacauuuguuaucgcuuuacacucucacagcaacgcucugggcagacuuuacuguccUCCGUUCUGUAGGUGAGGAAGCUgaggaugagcaaggaagggugaccu
...((((...((((((((((((((.(((.((.((((.((((....((((((......))))))..)))))))))))))..)))))....))))).))))....))))....

Structure
-aug    -aca    -     ----     -a   u  c    c    cucu      ac 
    cacc    uuug uuauc    gcuuu  cac cu acag aacg    gggcag  u
    ||||    |||| |||||    |||||  ||| || |||| ||||    ||||||   
    gugg    gaac aguag    CGAAG  GUG GA UGUC UUGC    ccuguc  u
ucca    gaag    g     gagU     GA   -  -    -    --CU      au 


Annotation confidence Not enough data
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Genome context
chr25: 33546337-33546447 [+]

Database links

Mature eca-miR-9039

Accession MIMAT0034581
Description Equus caballus eca-miR-9039 mature miRNA
Sequence 64 - UCCGUUCUGUAGGUGAGGAAGCU - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545