miRBase entry: eca-mir-9040

Stem-loop eca-mir-9040


Accession
MI0028204
Description
Equus caballus eca-mir-9040 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
gaugccugugcuggaacugacugacugcuggcauccugcaaggcagugugggauggaacACUGUCCUACCGGAUGCCAGUAGCcagaguccccaccucuuuca
((.....(((..(((.((..(((.((((((((((((.(..(((((((((........)))))).)))..))))))))))))).)))))))).))).....)).

Structure
-  ugccu   cu   a  ga   a            u ca   -      ggg 
 ga     gug  gga cu  cug cugcuggcaucc g  agg cagugu   a
 ||     |||  ||| ||  ||| |||||||||||| |  ||| ||||||    
 cu     cac  ccu ga  gac GAUGACCGUAGG C  UCC GUCAca   u
a  uucuc   -c   -  --   C            - CA   U      agg 


Annotation confidence Not enough data
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Genome context
chr25: 38044698-38044800 [+]

Database links

Mature eca-miR-9040

Accession MIMAT0034582
Description Equus caballus eca-miR-9040 mature miRNA
Sequence 60 - ACUGUCCUACCGGAUGCCAGUAGC - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545